The decision to ban the films came amid a rise in military tensions over the disputed territory of Kashmir.
The boycott was imposed after some Indian film-makers had banned Pakistani actors from working in Bollywood films.
Bollywood is popular in Pakistan, and the self-imposed ban is reported to have led to a dramatic loss of revenue.
The move followed a surge in violence in Indian-administered Kashmir.
Film distributors and cinema owners in Pakistan said they would resume screening the films on Monday.